Protein ZmEREB52 | |
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Information | |
TF Name: | ZmEREB52 |
Species: | Maize |
TF Family: | AP2/ERF-ERF |
Gene Name(Synonym): | EREB52 |
Uniprot ID: | B6UDE8 |
ZmEREB52 is a protein in the AP2/ERF-ERF family.
Overview of domains present in v5 transcripts | |
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PF00847 | |
Zm00001eb145420_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
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Zm00001d042588 | DAPseq | sequence | fimo | position | |
Zm00001d042588 | DAPseq | sequence | fimo | position | |
Zm00001d042588 | ChIPseq | sequence | fimo | position | |
Zm00001d042588 | PChIPseq | sequence | fimo | position |
MSAADSLTSGRGRRAEPPLPRLKRVRVYFVDADATDTDSSGNEDERGKRRVREVIHIDVESASALTRSAQPLVLPKKRPL
PSQAAAAALVRRRSSGAGFRRRFPGVRLRPWGKYAAEIRDPHQRKRLWLGTFDTAEEAAAAYDDAALRLKGSRHVVTGFP
AEAPPPWPRLGLRPRREVPKEAAEGAAEEDGEALASAPVPAAAPASLDSQAVDGTALVCPFSSPISVLRHAADEAPAAPA
LPAFEFLYSGLGELGDLGSATAPSKAVAAEFDCLPWWEGEDFVTVTGLTASAGAAVSVI
MSAADSLTSGRGRRAEPPLPRLKRVRVYFVDADATDTDSSGNEDERGKRRVREVIHIDVESASALTRSAQPLVLPKKRPL
PSQAAAAALVRRRSSGAGFRRRFPGVRLRPWGKYAAEIRDPHQRKRLWLGTFDTAEEAAAAYDDAALRLKGSRHVVTGFP
AEAPPPWPRLGLRPRREVPKEAAEGAAEEDGEALASAPVPAAAPASLDSQAVDGTALVCPFSSPISVLRHAADEAPAAPA
LPAFEFLYSGLGELGDLGSATAPSKAVAAEFDCLPWWEGEDFVTVTGLTASAGAAVSVI
MSAADSLTSGRGRRAEPPLPRLKRVRVYFVDADATDTDSSGNEDERGKRRVREVIHIDVESASALTRSAQPLVLPKKRPL
PSQAAAAALVRRRSSGAGFRRRFPGVRLRPWGKYAAEIRDPHQRKRLWLGTFDTAEEAAAAYDDAALRLKGSRHVVTGFP
AEAPPPWPRLGLRPRREVPKEAAEGAAEEDGEALASAPVPAAAPASLDSQAVDGTALVCPFSSPISVLRHAADEAPAAPA
LPAFEFLYSGLGELGDLGSATAPSKAVAAEFDCLPWWEGEDFVTVTGLTASAGAAVSVI
MSAADSLTSGRGRRAEPPLPRLKRVRVYFVDADATDTDSSGNEDERGKRRVREVIHIDVESASALTRSAQPLVLPKKRPL
PSQAAAAALVRRRSSGAGFRRRFPGVRLRPWGKYAAEIRDPHQRKRLWLGTFDTAEEAAAAYDDAALRLKGSRHVVTGFP
AEAPPPWPRLGLRPRREVPKEAAEGAAEEDGEALASAPVPAAAPASLDSQAVDGTALVCPFSSPISVLRHAADEAPAAPA
LPAFEFLYSGLGELGDLGSATAPSKAVAAEFDCLPWWEGEDFVTVTGLTASAGAAVSVI
MSAADSLTSGRGRRAEPPLPRLKRVRVYFVDADATDTDSSGNEDERGKRRVREVIHIDVESASALTRSAQPLVLPKKRPL
PSQAAAAALVRRRSSGAGFRRRFPGVRLRPWGKYAAEIRDPHQRKRLWLGTFDTAEEAAAAYDDAALRLKGSRHVVTGFP
AEAPPPWPRLGLRPRREVPKEAAEGAAEEDGEALASAPVPAAAPASLDSQAVDGTALVCPFSSPISVLRHAADEAPAAPA
LPAFEFLYSGLGELGDLGSATAPSKAVAAEFDCLPWWEGEDFVTVTGLTASAGAAVSVI
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00847 |
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Hover here to show all domains |
ATTCTCCTACCCCTCTTTCCCGCCC...
ATTCTCCTACCCCTCTTTCCCGCCCTTAAGCACCTGCCAAACCCTCTTTAAACCCTCGAGTCATACTCAAAATTTCTCGCGTTGTTGGCTTTCTCGCCGCAATCCGTCCGGGGTAGCCGAGACAGAGGACCCTCGAGCTCGATTTCATAGGTTTCATCTCGGATTTTGAGGTTTTGGGTGGTGGGGATTCTTGGGTTGCCTTTGCTTTTGTTTGACCGGATCTTGGAGTGTGTGCTGCTGTCGTTAGCTCACTGGGAGCGGCAGCAGATCTGTGAATCAACCCCCTACAGAACCTCCGAATCTTGCGAGTCTCCCGGAAAGTTTTGCTTTTGGGGGTGCGAATTTGGTTCTAGTTTGCTCGATTTGAGCCGAGGCTTTTGGTGATTTCTTGTAACGAGATTTGAGGCGGAGGCTTGGCAGTAGCTGCGGTGGATCTGCGGCCTACGGCGATGTCTGCTGCCGACTCCCTCACCTCCGGCCGGGGCCGCCGCGCGGAGCCTCCCCTGCCCCGCCTGAAGCGTGTCCGCGTTTACTTCGTGGACGCCGACGCTACGGACACCGACTCCTCTGGCAACGAGGACGAGCGCGGCAAGCGGCGCGTGCGGGAGGTCATCCACATCGACGTGGAGTCCGCCTCGGCTCTGACGCGGTCGGCGCAGCCGCTGGTGCTCCCGAAGAAGCGGCCGCTGCCGTCCCAGGCGGCGGCGGCGGCGCTCGTGCGGCGACGCTCCTCCGGGGCCGGGTTCCGGCGGCGCTTCCCCGGCGTCCGGCTCCGACCGTGGGGCAAGTACGCCGCGGAGATCCGCGACCCGCACCAGCGGAAGCGCCTGTGGCTCGGCACCTTCGACACAGCGGAGGAGGCCGCCGCGGCCTACGACGACGCCGCGCTCCGCCTCAAGGGCTCGCGCCACGTCGTCACCGGCTTCCCCGCTGAGGCGCCTCCCCCCTGGCCGCGCCTGGGGCTCCGTCCTCGCCGGGAGGTCCCCAAGGAAGCGGCGGAGGGCGCCGCGGAAGAGGACGGAGAGGCCCTCGCATCGGCCCCGGTCCCGGCGGCAGCGCCCGCGTCACTGGATTCGCAGGCGGTGGACGGCACCGCCCTGGTCTGCCCGTTCTCGTCTCCAATCTCTGTTCTCCGTCACGCCGCTGACGAGGCGCCGGCCGCACCCGCCCTGCCGGCGTTCGAGTTCCTCTATTCGGGGCTTGGGGAGCTCGGCGACCTCGGCTCAGCGACGGCGCCATCGAAGGCGGTGGCGGCGGAGTTCGACTGCCTGCCGTGGTGGGAGGGCGAGGACTTCGTGACAGTGACAGGCCTCACGGCGTCAGCCGGTGCCGCCGTCAGCGTCATATAACGGCGTTACCTTTTACACCCCTCGGTGCTCGGGCCTCGTCGTCGTGCCGTGGCGCCATTTCGGATGCTCAGGGCGGGAAACGCGTGGGCTGCCGTGTGGCGGCATCGAATCGGAGTAAAGCTAGTACTAGTATTGTTTTTTTATTAATTATTAACTGACTACTCTGCTAGAGGCTAGAGCAGAGTGGTTGCTTGTGGCGGCGAGTCGTATGTCTAGGCGTGGCGGGCCCCACTGGGCCAGGCAGGTTCTGCTTTCTGTGTGCGGGTGCCTTGAACCGCACGGCTCTCGCGTGGAAACGCAGCAGTGAACTGTAATGTGGTGCTAAGCTAGCGATTAGTGGCATGTGTTAATTGGCCGTCATTAGAACTAAGTAAATTAGGAGTACTAGGAGTCAGTGTACGTTTACCGTGTGGCAATGATCATGCGAATCTCACATCGAATCAGTTTCCAAGCACAGA
MSAADSLTSGRGRRAEPPLPRLKRVRVYFVDADATDTDSSGNEDERGKRRVREVIHIDVESASALTRSAQPLVLPKKRPL
PSQAAAAALVRRRSSGAGFRRRFPGVRLRPWGKYAAEIRDPHQRKRLWLGTFDTAEEAAAAYDDAALRLKGSRHVVTGFP
AEAPPPWPRLGLRPRREVPKEAAEGAAEEDGEALASAPVPAAAPASLDSQAVDGTALVCPFSSPISVLRHAADEAPAAPA
LPAFEFLYSGLGELGDLGSATAPSKAVAAEFDCLPWWEGEDFVTVTGLTASAGAAVSVI
TCATTCTCCTACCCCTCTTTCCCGC...
TCATTCTCCTACCCCTCTTTCCCGCCCTTAAGCACCTGCCAAACCCTCTTTAAACCCTCGAGTCATACTCAAAATTTCTCGCGTTGTTGGCTTTCTCGCCGCAATCCGTCCGGGGTAGCCGAGACAGAGGACCCTCGAGCTCGATTTCATAGGTTTCATCTCGGATTTTGAGGTTTTGGGTGGTGGGGATTCTTGGGTTGCCTTTGCTTTTGTTTGACCGGATCTTGGAGTGTGTGCTGCTGTCGTTAGCTCACTGGGAGCGGCAGCAGATCTGTGAATCAACCCCCTACAGAACCTCCGAATCTTGCGAGTCTCCCGGAAAGTTTTGCTTTTGGGGGTGCGAATTTGGTTCTAGTTTGCTCGATTTGAGCCGAGGCTTTTGGTGATTTCTTGTAACGAGATTTGAGGCGGAGGCTTGGCAGTAGCTGCGGTGGATCTGCGGCCTACGGCGATGTCTGCTGCCGACTCCCTCACCTCCGGCCGGGGCCGCCGCGCGGAGCCTCCCCTGCCCCGCCTGAAGCGTGTCCGCGTTTACTTCGTGGACGCCGACGCTACGGACACCGACTCCTCTGGCAACGAGGACGAGCGCGGCAAGCGGCGCGTGCGGGAGGTCATCCACATCGACGTGGAGTCCGCCTCGGCTCTGACGCGGTCGGCGCAGCCGCTGGTGCTCCCGAAGAAGCGGCCGCTGCCGTCCCAGGCGGCGGCGGCGGCGCTCGTGCGGCGACGCTCCTCCGGGGCCGGGTTCCGGCGGCGCTTCCCCGGCGTCCGGCTCCGACCGTGGGGCAAGTACGCCGCGGAGATCCGCGACCCGCACCAGCGGAAGCGCCTGTGGCTCGGCACCTTCGACACAGCGGAGGAGGCCGCCGCGGCCTACGACGACGCCGCGCTCCGCCTCAAGGGCTCGCGCCACGTCGTCACCGGCTTCCCCGCTGAGGCGCCTCCCCCCTGGCCGCGCCTGGGGCTCCGTCCTCGCCGGGAGGTCCCCAAGGAAGCGGCGGAGGGCGCCGCGGAAGAGGACGGAGAGGCCCTCGCATCGGCCCCGGTCCCGGCGGCAGCGCCCGCGTCACTGGATTCGCAGGCGGTGGACGGCACCGCCCTGGTCTGCCCGTTCTCGTCTCCAATCTCTGTTCTCCGTCACGCCGCTGACGAGGCGCCGGCCGCACCCGCCCTGCCGGCGTTCGAGTTCCTCTATTCGGGGCTTGGGGAGCTCGGCGACCTCGGCTCAGCGACGGCGCCATCGAAGGCGGTGGCGGCGGAGTTCGACTGCCTGCCGTGGTGGGAGGGCGAGGACTTCGTGACAGTGACAGGCCTCACGGCGTCAGCCGGTGCCGCCGTCAGCGTCATATAACGGCGTTACCTTTTACACCCCTCGGTGCTCGGGCCTCGTCGTCGTGCCGTGGCGCCATTTCGGATGCTCAGGGCGGGAAACGCGTGGGCTGCCGTGTGGCGGCATCGAATCGGAGTAAAGCTAGTACTAGTATTGTTTTTTTATTAATTATTAACTGACTACTCTGCTAGAGGCTAGAGCAGAGTGGTTGCTTGTGGCGGCGAGTCGTATGTCTAGGCGTGGCGGGCCCCACTGGGCCAGGCAGGTTCTGCTTTCTGTGTGCGGGTGCCTTGAACCGCACGGCTCTCGCGTGGAAACGCAGCAGTGAACTGTAATGTGGTGCTAAGCTAGCGATTAGTGGCATGTGTTAATTGGCCGTCATTAGAACTAAGTAAATTAGGAGTACTAGGAGTCAGTGTACGTTTACCGTGTGGCAATGATCATGCGAATCTCACATCGAATCAGTTTCCAAGCACAGAATATATCATCGAAAGTCCGTCACTTGCGCAA
MSAADSLTSGRGRRAEPPLPRLKRVRVYFVDADATDTDSSGNEDERGKRRVREVIHIDVESASALTRSAQPLVLPKKRPL
PSQAAAAALVRRRSSGAGFRRRFPGVRLRPWGKYAAEIRDPHQRKRLWLGTFDTAEEAAAAYDDAALRLKGSRHVVTGFP
AEAPPPWPRLGLRPRREVPKEAAEGAAEEDGEALASAPVPAAAPASLDSQAVDGTALVCPFSSPISVLRHAADEAPAAPA
LPAFEFLYSGLGELGDLGSATAPSKAVAAEFDCLPWWEGEDFVTVTGLTASAGAAVSVI
ATGTCTGCTGCCGACTCCCTCACCT...
ATGTCTGCTGCCGACTCCCTCACCTCCGGCCGGGGCCGCCGCGCGGAGCCTCCCCTGCCCCGCCTGAAGCGTGTCCGCGTTTACTTCGTGGACGCCGACGCTACGGACACCGACTCCTCTGGCAACGAGGACGAGCGCGGCAAGCGGCGCGTGCGGGAGGTCATCCACATCGACGTGGAGTCCGCCTCGGCTCTGACGCGGTCGGCGCAGCCGCTGGTGCTCCCGAAGAAGCGGCCGCTGCCGTCCCAGGCGGCGGCGGCGGCGCTCGTGCGGCGACGCTCCTCCGGGGCCGGGTTCCGGCGGCGCTTCCCCGGCGTCCGGCTCCGACCGTGGGGCAAGTACGCCGCGGAGATCCGCGACCCGCACCAGCGGAAGCGCCTGTGGCTCGGCACCTTCGACACAGCGGAGGAGGCCGCCGCGGCCTACGACGACGCCGCGCTCCGCCTCAAGGGCTCGCGCCACGTCGTCACCGGCTTCCCCGCTGAGGCGCCTCCCCCCTGGCCGCGCCTGGGGCTCCGTCCTCGCCGGGAGGTCCCCAAGGAAGCGGCGGAGGGCGCCGCGGAAGAGGACGGAGAGGCCCTCGCATCGGCCCCGGTCCCGGCGGCAGCGCCCGCGTCACTGGATTCGCAGGCGGTGGACGGCACCGCCCTGGTCTGCCCGTTCTCGTCTCCAATCTCTGTTCTCCGTCACGCCGCTGACGAGGCGCCGGCCGCACCCGCCCTGCCGGCGTTCGAGTTCCTCTATTCGGGGCTTGGGGAGCTCGGCGACCTCGGCTCAGCGACGGCGCCATCGAAGGCGGTGGCGGCGGAGTTCGACTGCCTGCCGTGGTGGGAGGGCGAGGACTTCGTGACAGTGACAGGCCTCACGGCGTCAGCCGGTGCCGCCGTCAGCGTCATATAA
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